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Encyclopedia > H5N1 genetic structure

Image:Flu und legende color c.jpg Image File history File links Flu_und_legende_color_c. ...

H5N1
  • Influenza A virus subtype H5N1
  • Genetic structure
  • Infection
  • Global spread
WHO pandemic phases
  1. Low risk
  2. New virus
  3. Self limiting
  4. Person to person
  5. Epidemic exists
  6. Pandemic exists

"H5N1 genetic structure" refers to the molecular structure of the H5N1 virus's RNA. Image File history File links Colorized_transmission_electron_micrograph_of_Avian_influenza_A_H5N1_viruses. ... Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus Influenzavirus A is a genus of a family of viruses called Orthomyxoviridae in virus classification. ... Influenza A virus subtype H5N1, also known as A(H5N1) or simply H5N1, is a subtype of the Influenza A virus which can cause illness in humans and many other animal species. ... See Epidemiology of WHO-confirmed human cases of avian influenza A(H5N1) infection. ... The global spread of H5N1 in birds is considered a significant pandemic threat. ... Main article: Global spread of H5N1 Notes: Source WHO Confirmed Human Cases of H5N1 [T]he incidence of human cases peaked, in each of the three years in which cases have occurred, during the period roughly corresponding to winter and spring in the northern hemisphere. ... See Influenza pandemic for government preparation for an H5N1 pandemic H5N1 impact is the effect or influence of H5N1 in human society; especially the financial, political, social and personal responses to both actual and predicted deaths in birds, humans, and other animals. ... An influenza pandemic is a large scale epidemic of the influenza virus, such as the 1918 Spanish flu. ... An influenza pandemic is a large scale epidemic of the influenza virus, such as the 1918 Spanish flu. ... Influenza A virus subtype H5N1, also known as A(H5N1) or simply H5N1, is a subtype of the Influenza A virus which can cause illness in humans and many other animal species. ... This article or section does not adequately cite its references or sources. ...


H5N1 is an Influenza A virus subtype. Experts believe it might mutate into a form that transmits easily from person to person. If such a mutation occurs, it might remain an H5N1 subtype or could shift subtypes as did H2N2 when it evolved into the Hong Kong Flu strain of H3N2. Influenza A virus, the virus that causes Avian flu. ... The Asian Flu was a pandemic outbreak of influenza that originated in China in 1957 and spread worldwide that same year. ... The Hong Kong Flu was a pandemic outbreak of influenza that began in Hong Kong in 1968 and spread to the United States of America that year. ... H3N2 is a subtype of the species Influenza A virus (sometimes called bird flu virus). ...


H5N1 has mutated [1] through antigenic drift into dozens of highly pathogenic varieties, but all currently belonging to genotype Z of avian influenza virus H5N1. Genotype Z emerged through reassortment in 2002 from earlier highly pathogenic genotypes of H5N1 that first appeared in China in 1996 in birds and in Hong Kong in 1997 in humans. [2] The "H5N1 viruses from human infections and the closely related avian viruses isolated in 2004 and 2005 belong to a single genotype, often referred to as genotype Z." [1] It has been suggested that mutant be merged into this article or section. ... Antigenic drift refers to mutations in the influenza virus over time. ... A pathogen or infectious agent is a biological agent that causes disease or illness to its host. ... The genotype is the specific genetic genome of an individual, in the form of DNA. It is basically ones DNA including the influence of environmental variation, it codes for the phenotype of that individual. ... Reassortment is the exchange of DNA between viruses inside a host cell. ... A pathogen or infectious agent is a biological agent that causes disease or illness to its host. ... “Aves” redirects here. ... Trinomial name Homo sapiens sapiens Linnaeus, 1758 Humans, or human beings, are bipedal primates belonging to the mammalian species Homo sapiens (Latin: wise man or knowing man) under the family Hominidae (the great apes). ...


This infection of humans coincided with an epizootic (an epidemic in nonhumans) of H5N1 influenza in Hong Kong’s poultry population. This panzootic (a disease affecting animals of many species especially over a wide area) outbreak was stopped by the killing of the entire domestic poultry population within the territory. The name H5N1 refers to the subtypes of surface antigens present on the virus: hemagglutinin type 5 and neuraminidase type 1. An epizootic is the nonhuman equivalent of an epidemic, meaning that large numbers of animals are infected with a disease. ... In epidemiology, an epidemic (from [[Latin language] epi- upon + demos people) is a disease that appears as new cases in a given human population, during a given period, at a rate that substantially exceeds what is expected, based on recent experience (the number of new cases in the population during... An antigen is a substance that stimulates an immune response, especially the production of antibodies. ... Groups I: dsDNA viruses II: ssDNA viruses III: dsRNA viruses IV: (+)ssRNA viruses V: (-)ssRNA viruses VI: ssRNA-RT viruses VII: dsDNA-RT viruses A virus is a microscopic particle (ranging in size from 20 - 300 nm) that can infect the cells of a biological organism. ... Hemagglutinin, as depicted in a simplified molecular model. ... Neuraminidase ribbon diagram Neuraminidase is a glycoside hydrolase enzyme (EC 3. ...


Genotype Z of H5N1 is now the dominant genotype of H5N1. Genotype Z is endemic in birds in southeast Asia and represents a long term pandemic threat.

Contents

Terminology

The Orthomyxovirus family consists of 5 genera: Influenzavirus A, Influenzavirus B, Influenzavirus C, Isavirus, and Thogotovirus. Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus The Orthomyxoviridae are a family of RNA viruses which, so far as is known, infect mainly vertebrates (Thogotovirus in ticks, Isavirus in the sea louse). ... Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus Influenzavirus A is a genus of a family of viruses called Orthomyxoviridae in virus classification. ... Influenzavirus B is a genus in the virus family Orthomyxoviridae. ... Influenzavirus C is a genus in the virus family Orthomyxoviridae. ... Infectious salmon anemia or anaemia (ISA) is a viral disease of Atlantic Salmon (Salmo salar) which affect fish farms in Canada, Norway and Scotland, causing severe losses to infected farms. ... Thogotovirus is a genus in the virus family Orthomyxoviridae. ...


The "RNA viruses" include the "negative-sense ssRNA viruses" which include the Order "Mononegavirales" which includes the Family "Orthomyxoviridae" which contains five genera, classified by variations in nucleoprotein (NP and M) antigens. One of these is the Genus "Influenzavirus A" which consists of a single species called "Influenza A virus"; one of its subtypes is H5N1. Families Paramyxoviridae Rhabdoviridae Filoviridae Bornaviridae The Mononegavirales are an order of viruses comprising species that have a non-segmented, negative sense RNA genome. ... A nucleoprotein is any protein which is structurally associated with nucleic acid (either DNA or RNA). ... Influenza A virus, the virus that causes Avian flu. ... Influenza A virus subtype H5N1, also known as A(H5N1) or simply H5N1, is a subtype of the Influenza A virus which can cause illness in humans and many other animal species. ...


H5N1 (like the other avian flu viruses) has strains called "highly pathogenic" (HP) and "low-pathogenic" (LP). Avian influenza viruses that cause HPAI are highly virulent, and mortality rates in infected flocks often approach 100%. LPAI viruses are generally of lower virulence, but these viruses can serve as progenitors to HPAI viruses. The current strain of H5N1 responsible for die-offs of domestic birds in Asia is an HPAI strain; other strains of H5N1 occurring elsewhere in the world are less virulent and, therefore, are classified as LPAI strains. All HPAI strains identified to date have involved H5 and H7 subtypes. The distinction concerns pathogenicity in poultry, not humans. Normally a highly pathogenic avian virus is not highly pathogenic to either humans or non-poultry birds. This current strain of H5N1 is unusual in being deadly to so many species. Virulence is a term used to refer to either the relative pathogenicity or the relative ability to do damage to the host of an infectious agent. ... Categories: Animal stubs | Animal behaviour | Social psychology ...


Both "influenza" (meaning flu) and "A" (meaning species type A) can be used as adjectives of the noun "virus" resulting in the noun phrase "influenza A virus"; which when capitalized is the proper noun Influenza A virus which is the name of the species the noun phrase also refers to. Influenza A virus, the virus that causes Avian flu. ...


Context

Virus

A virus is one type of microscopic parasite that infects cells in biological organisms. Groups I: dsDNA viruses II: ssDNA viruses III: dsRNA viruses IV: (+)ssRNA viruses V: (-)ssRNA viruses VI: ssRNA-RT viruses VII: dsDNA-RT viruses A virus is a microscopic particle (ranging in size from 20 - 300 nm) that can infect the cells of a biological organism. ... A parasite is an organism that spends a significant portion of its life in or on the living tissue of a host organism and which causes harm to the host without immediately killing it. ... In medicine, infectious disease or communicable disease is disease caused by a biological agent (e. ... Drawing of the structure of cork as it appeared under the microscope to Robert Hooke from Micrographia which is the origin of the word cell. Cells in culture, stained for keratin (red) and DNA (green). ...

Orthomyxoviridae

The Orthomyxoviridae are a family of RNA viruses which infect vertebrates. It includes those viruses which cause influenza. Viruses of this family contain 7 to 8 segments of linear negative-sense single stranded RNA. Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus The Orthomyxoviridae are a family of RNA viruses which infect vertebrates. ... An RNA virus is a virus that either uses RNA as its genetic material, or whose genetic material passes through an RNA intermediate during replication. ... Groups I: dsDNA viruses II: ssDNA viruses III: dsRNA viruses IV: (+)ssRNA viruses V: (-)ssRNA viruses VI: ssRNA-RT viruses VII: dsDNA-RT viruses A virus is a microscopic particle (ranging in size from 20 - 300 nm) that can infect the cells of a biological organism. ... Influenza, commonly known as flu, is an infectious disease of birds and mammals caused by an RNA virus of the family Orthomyxoviridae (the influenza viruses). ... This article or section does not adequately cite its references or sources. ...

Influenza virus

"Influenza virus" refers to a subset of Orthomyxoviridae that create influenza. This is not a phylogenetics based taxonomic category. Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus The Orthomyxoviridae are a family of RNA viruses which infect vertebrates. ... Influenza, commonly known as flu, is an infectious disease of birds and mammals caused by an RNA virus of the family Orthomyxoviridae (the influenza viruses). ... In biology, phylogenetics (Greek: phylon = tribe, race and genetikos = relative to birth, from genesis = birth) is the study of evolutionary relatedness among various groups of organisms (e. ... Taxonomy (from Greek ταξινομία from the words taxis = order and nomos = law) may refer to either a hierarchical classification of things, or the principles underlying the classification. ...

Influenza A virus

Influenza A viruses have 10 genes on eight separate RNA molecules (called: PB2, PB1, PA, HA, NP, NA, M, and NS). HA, NA, and M specify the structure of proteins that are most medically relevant as targets for antiviral drugs and antibodies. (An eleventh recently discovered gene called PB1-F2 sometimes creates a protein but is absent from some influenza virus isolates.[3]) This segmentation of the influenza genome facilitates genetic recombination by segment reassortment in hosts who are infected with two different influenza viruses at the same time.[1] Influenza A virus is the only species in the Influenzavirus A genus of the Orthomyxoviridae family and are negative sense, single-stranded, segmented RNA viruses. For other meanings of this term, see gene (disambiguation). ... RNA codons. ... Each antibody binds to a specific antigen; an interaction similar to a lock and key. ... In biology the genome of an organism is the whole hereditary information of an organism that is encoded in the DNA (or, for some viruses, RNA). ... This article seems to have errors. ... Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus Influenzavirus A is a genus of a family of viruses called Orthomyxoviridae in virus classification. ... For other uses of the word, please see Genus (disambiguation). ... Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus The Orthomyxoviridae are a family of RNA viruses which infect vertebrates. ... An RNA virus is a virus that either uses RNA as its genetic material, or whose genetic material passes through an RNA intermediate during replication. ...


"The influenza virus RNA polymerase is a multifunctional complex composed of the three viral proteins PB1, PB2 and PA, which, together with the viral nucleoprotein NP, form the minimum complement required for viral mRNA synthesis and replication." [4]


Surface encoding gene segments

  • Surface antigen encoding gene segments (RNA molecule): (HA, NA)
  • HA codes for hemagglutinin which is an antigenic glycoprotein found on the surface of the influenza viruses and is responsible for binding the virus to the cell that is being infected. Hemagglutinin forms spikes at the surface of flu viruses that function to attach viruses to cells. This attachment is required for efficient transfer of flu virus genes into cells, a process that can be blocked by antibodies that bind to the hemagglutinin proteins. One genetic factor in distinguishing between human flu viruses and avian flu viruses is that "avian influenza HA bind alpha 2-3 sialic acid receptors while human influenza HA bind alpha 2-6 sialic acid receptors. Swine influenza viruses have the ability to bind both types of sialic acid receptors." [5] A mutation found in Turkey in 2006 "involves a substitution in one sample of an amino acid at position 223 of the haemoagglutinin receptor protein. This protein allows the flu virus to bind to the receptors on the surface of its host's cells. This mutation has been observed twice before — in a father and son in Hong Kong in 2003, and in one fatal case in Vietnam last year. It increases the virus's ability to bind to human receptors, and decreases its affinity for poultry receptors, making strains with this mutation better adapted to infecting humans." Another mutation in the same sample at position 153 has as yet unknown effects. [6] "Amino acid residues at positions 226 and 228 of the receptor binding pocket of HA appear to determine binding affinity to cell surface receptors and to influence the selective binding of the virus to avian (sialic acid -2,3-NeuAcGal) or human (sialic acid -2,6-NeuAcGal) cell surface receptors. The human A/HK/212/03 and A/HK/213/03 isolates retain the signature associated with avian receptor binding, but they have a unique amino acid substitution (Ser227Ile) within the receptor binding pocket that was not present even in the closely related A/Gs/HK/739.2/02 (genotype Z+) virus."[7] Recent research reveals that humans have avian type receptors at very low densities and chickens have human type receptors at very low densities. [8] Researchers "found that the mutations at two places in the gene, identified as 182 and 192, allow the virus to bind to both bird and human receptors."[9][10] See research articles Host Range Restriction and Pathogenicity in the Context of Influenza Pandemic (Centers for Disease Control and Prevention, 2006) (by Gabriele Neumann and Yoshihiro Kawaoka) and Structure and Receptor Specificity of the Hemagglutinin from an H5N1 Influenza Virus (American Association for the Advancement of Science, 2006) (by James Stevens, Ola Blixt, Terrence M. Tumpey, Jeffery K. Taubenberger, James C. Paulson, Ian A. Wilson) for further details.
  • NA codes for neuraminidase which is an antigenic glycoprotein enzyme found on the surface of the influenza viruses. It helps the release of progeny viruses from infected cells. Flu drugs Tamiflu and Relenza work by inhibiting some strains of neuraminidase. They were developed based on N2 and N9. "In the N1 form of the protein, a small segment called the 150-loop is inverted, creating a hollow pocket that does not exist in the N2 and N9 proteins. [...] When the researchers looked at how existing drugs interacted with the N1 protein, they found that, in the presence of neuraminidase inhibitors, the loop changed its conformation to one similar to that in the N2 and N9 proteins."[11]

An antigen is a substance that stimulates an immune response, especially the production of antibodies. ... Hemagglutinin, as depicted in a simplified molecular model. ... An antigen is a substance that stimulates an immune response, especially the production of antibodies. ... A glycoprotein is a macromolecule composed of a protein and a carbohydrate (an oligosaccharide). ... Influenza, commonly known as flu, is an infectious disease of birds and mammals caused by an RNA virus of the family Orthomyxoviridae (the influenza viruses). ... Groups I: dsDNA viruses II: ssDNA viruses III: dsRNA viruses IV: (+)ssRNA viruses V: (-)ssRNA viruses VI: ssRNA-RT viruses VII: dsDNA-RT viruses A virus is a microscopic particle (ranging in size from 20 - 300 nm) that can infect the cells of a biological organism. ... Drawing of the structure of cork as it appeared under the microscope to Robert Hooke from Micrographia which is the origin of the word cell. Cells in culture, stained for keratin (red) and DNA (green). ... Hemagglutinin, as depicted in a simplified molecular model. ... Drawing of the structure of cork as it appeared under the microscope to Robert Hooke from Micrographia which is the origin of the word cell. Cells in culture, stained for keratin (red) and DNA (green). ... Sialic acid Sialic acid is a derivative of a nine-carbon monosaccharide, named from the Greek σιαλοσ (sialos) saliva. It is the negative charge of this chemical that is responsible for the slippery feel of saliva and mucins coating the body’s organs. ... Hemagglutinin, as depicted in a simplified molecular model. ... Neuraminidase ribbon diagram Neuraminidase is a glycoside hydrolase enzyme (EC 3. ... An antigen is a substance that stimulates an immune response, especially the production of antibodies. ... A glycoprotein is a macromolecule composed of a protein and a carbohydrate (an oligosaccharide). ... Ribbon diagram of the enzyme TIM, surrounded by the space-filling model of the protein. ... Influenza, commonly known as flu, is an infectious disease of birds and mammals caused by an RNA virus of the family Orthomyxoviridae (the influenza viruses). ... Groups I: dsDNA viruses II: ssDNA viruses III: dsRNA viruses IV: (+)ssRNA viruses V: (-)ssRNA viruses VI: ssRNA-RT viruses VII: dsDNA-RT viruses A virus is a microscopic particle (ranging in size from 20 - 300 nm) that can infect the cells of a biological organism. ... Neuraminidase ribbon diagram Neuraminidase is a glycoside hydrolase enzyme (EC 3. ...

Internal encoding gene segments

  • Internal viral protein encoding gene segments (RNA molecule): (M, NP, NS, PA, PB1, PB2) [12]

Matrix encoding gene segments

  • M codes for the matrix proteins (M1 and M2) that along with the two surface proteins (hemagglutinin and neuraminidase) make up the capsid (protective coat) of the virus. It encodes by using different reading frames from the same RNA segment.
    • M1 is a protein that binds to the viral RNA.
    • M2 is a protein that uncoats the virus exposing its contents (the eight RNA segments) to the cytoplasm of the host cell. The M2 transmembrane protein is an ion channel required for efficient infection. [13] The amino acid substitution (Ser31Asn) in M2 some H5N1 genotypes is associated with amantadine resistance. [14]

Hemagglutinin, as depicted in a simplified molecular model. ... Neuraminidase ribbon diagram Neuraminidase is a glycoside hydrolase enzyme (EC 3. ... A capsid is the outer shell of a virus. ... The M1 protein is a matrix protein of the influenza virus. ... The M2 protein is a proton-selective ion channel protein, integral in the cell membrane of the influenza A virus. ... A transmembrane protein is a protein that spans the entire biological membrane. ... Ion channels are pore-forming proteins that help to establish and control the small voltage gradient that exists across the plasma membrane of all living cells (see cell potential) by allowing the flow of ions down their electrochemical gradient. ...

Nucleoprotein encoding gene segments

  • NP codes for nucleoprotein.
  • NS: NS codes for two nonstructural proteins (NS1 and NEP). "[T]he pathogenicity of influenza virus was related to the nonstructural (NS) gene of the H5N1/97 virus". [15]
    • NS1: Non-structural: nucleus; effects on cellular RNA transport, splicing, translation. Anti-interferon protein.[16] The "NS1 of the highly pathogenic avian H5N1 viruses circulating in poultry and waterfowl in Southeast Asia might be responsible for an enhanced proinflammatory cytokine response (especially TNFa) induced by these viruses in human macrophages".[17] H5N1 NS1 is characterized by a single amino acid change at position 92. By changing the amino acid from glutamic acid to aspartic acid, the researchers were able to abrogate the effect of the H5N1 NS1. [This] single amino acid change in the NS1 gene greatly increased the pathogenicity of the H5N1 influenza virus." [18]
    • NEP: The "nuclear export protein (NEP, formerly referred to as the NS2 protein) mediates the export of vRNPs".[19]

A nucleoprotein is any protein which is structurally associated with nucleic acid (either DNA or RNA). ... The NS1 Influenza Protein is created by the internal protein encoding, linear negative-sense, single stranded RNA, NS gene segment; which found in Influenzavirus A, Influenzavirus B and Influenzavirus C; and which also codes for the nuclear export protein or NEP, formerly referred to as the NS2 protein, which mediates... Cytokines are a group of proteins and peptides that are used in organisms as signaling compounds. ... A macrophage of a mouse stretching its arms to engulf two particles, possibly pathogens Macrophages (Greek: big eaters, makros = long, phagein = eat) are white blood cells, more specifically phagocytes, acting in the nonspecific defense as well as the specific defense system of vertebrate animals. ...

Polymerase encoding gene segments

  • PA codes for the PA protein which is a critical component of the viral polymerase.
  • PB1 codes for the PB1 protein and the PB1-F2 protein.
    • The PB1 protein is a critical component of the viral polymerase.
    • The PB1-F2 protein is encoded by an alternative open reading frame of the PB1 RNA segment and "interacts with 2 components of the mitochondrial permeability transition pore complex, ANT3 and VDCA1, [sensitizing] cells to apoptosis. [...] PB1-F2 likely contributes to viral pathogenicity and might have an important role in determining the severity of pandemic influenza."[17] This was discovered by Chen et. al. and reported in Nature [20].
  • PB2 codes for the PB2 protein which is a critical component of the viral polymerase. 75% of H5N1 human virus isolates from Vietnam had a mutation consisting of Lysine at residue 627 in the PB2 protein; which is believed to cause high levels of virulence. [21] Until H5N1, all known avian influenza viruses had a Glu at position 627, while all human influenza viruses had a lysine.

RNAP from pictured during elongation. ... RNAP from pictured during elongation. ... A cell undergoing apoptosis. ... Nature is one of the most prominent scientific journals, first published on 4 November 1869. ... RNAP from pictured during elongation. ... Glutamic acid (Glu), also referred to as glutamate (the anion), is one of the 20 proteinogenic amino acids. ... Lysine is one of the 20 amino acids normally found in proteins. ...

Mutation

Influenza viruses have a relatively high mutation rate that is characteristic of RNA viruses. The H5N1 virus has mutated into a variety of types with differing pathogenic profiles; some pathogenic to one species but not others, some pathogenic to multiple species. [22] The ability of various influenza strains to show species-selectivity is largely due to variation in the hemagglutinin genes. Genetic mutations in the hemagglutinin gene that cause single amino acid substitutions can significantly alter the ability of viral hemagglutinin proteins to bind to receptors on the surface of host cells. Such mutations in avian H5N1 viruses can change virus strains from being inefficient at infecting human cells to being as efficient in causing human infections as more common human influenza virus types. [23] This doesn't mean one amino acid substitution can cause a pandemic but it does mean one amino acid substitution can cause an avian flu virus that is not pathogenic in humans to become pathogenic in humans. Influenza, commonly known as flu, is an infectious disease of birds and mammals caused by an RNA virus of the family Orthomyxoviridae (the influenza viruses). ... An RNA virus is a virus that either uses RNA as its genetic material, or whose genetic material passes through an RNA intermediate during replication. ... It has been suggested that mutant be merged into this article or section. ... Phenylalanine is one of the standard amino acids. ... In biochemistry, a receptor is a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand), such as a neurotransmitter, hormone, or other substance, and initiates the cellular response to the ligand. ...


In July 2004, researchers led by H. Deng of the Harbin Veterinary Research Institute, Harbin, China and Professor Robert Webster of the St Jude Children's Research Hospital, Memphis, Tennessee, reported results of experiments in which mice had been exposed to 21 isolates of confirmed H5N1 strains obtained from ducks in China between 1999 and 2002. They found "a clear temporal pattern of progressively increasing pathogenicity". [24] Results reported by Dr. Webster in July 2005 reveal further progression toward pathogenicity in mice and longer virus shedding by ducks. 2004 : January - February - March - April - May - June - July - August - September - October - November - December See also: July 2004 in sports Deaths in July • 31 David B. Haight • 29 Francis Crick • 29 Nafisa Joseph • 23 Joe Cahill • 23 Mehmood • 23 Illinois Jacquet • 23 Carlos Paredes... Harbin on a map of China For other meanings of Harbin, see Harbin (disambiguation). ... Robert G. (Rob) Webster (born May 7, 1932), in Balclutha New Zealand, is the virologist who in 1957 was the first to announce a link between human flu and bird flu. ... From the stjude. ... For other uses, see Memphis (disambiguation). ... Feral mouse A mouse (plural mice) is a rodent that belongs to one of numerous species of small mammals. ... Ongoing events • 2005 Atlantic and Pacific hurricanes • 2005 Maharashtra floods • 2005 Gujarat Flood • Expo 2005 in Aichi, Japan • Fuel prices • Gomery Comm. ...


See also

See H5N1 flu and Flu for details about the illnesses and H5N1 and H3N2 for details about the causitive agents. ... Influenza, commonly known as flu, is an infectious disease of birds and mammals caused by an RNA virus of the family Orthomyxoviridae (the influenza viruses). ... Influenza A virus, the virus that causes Avian flu. ... Genera Influenzavirus A Influenzavirus B Influenzavirus C Isavirus Thogotovirus The Orthomyxoviridae are a family of RNA viruses which infect vertebrates. ...

Sources

  1. ^ a b c The World Health Organization Global Influenza Program Surveillance Network (2005). "Evolution of H5N1 viruses in Asia". Emerging Infectious Diseases 11 (10).  Figure 1 of the article gives a diagramatic representation of the genetic relatedness of Asian H5N1 hemagglutinin genes from various isolates of the virus.
  2. ^ WHO (October 28, 2005). H5N1 avian influenza: timeline.
  3. ^ Weisan Chen, Paul A. Calvo et al. "A novel influenza A virus mitochondrial protein that induces cell death". Nature Medicine 7: 1306-1312.  doi:10.1038/nm1201-1306
  4. ^ M. T. Michael Lee, Konrad Bishop, Liz Medcalf, Debra Elton, Paul Digard, and Laurence Tiley (January 15, 2002). "Definition of the minimal viral components required for the initiation of unprimed RNA synthesis by influenza virus RNA polymerase". Nucleic Acids Research 30 (2): 429–438. Retrieved on 2006-12-09. 
  5. ^ Alex Greninger (July 16, 2004). "The Definition and Measurement of Dangerous Research". Retrieved on 2006-12-09. 
  6. ^ Nature magazine article "Alarms ring over bird flu mutations" January 2006
  7. ^ H5N1 influenza: A protean pandemic threat
  8. ^ Influenza Report 2006 Online book page 51
  9. ^ CIDRAP article Study finds 2 mutations that help H5N1 infect humans published November 21, 2006
  10. ^ Bloomberg News articles Two Bird Flu Gene Mutations Might Lead to Faster Human Spread published November 15, 2006
  11. ^ Scidev.net News article Bird flu protein's 'pocket' could inspire better drugs published August 16, 2006
  12. ^ The Threat of Pandemic Influenza: Are We Ready? Page 118
  13. ^ Influenza virus replication in Medical Microbiology, 4th edition edited by Samuel Baron. 1996 Chapter 58. ISBN 0-9631172-1-1.
  14. ^ H5N1 influenza: A protean pandemic threat National Academy of Sciences | PNAS | May 25, 2004 | vol. 101 | no. 21 | 8156-8161
  15. ^ Characterization of Highly Pathogenic H5N1 Avian Influenza A Viruses Isolated from South Korea Journal of Virology, March 2005, p. 3692-3702, Vol. 79, No. 6. Also, Pandemic Influenza Center for Infectious Disease Research & Policy Academic Health Center -- University of Minnesota
  16. ^ NS1 described in Inhibition by the NS1 protein - Enhanced virulence/viral pathogenesis by enabling the virus to disarm the host cell type IFN defense system Pathobiologics International
  17. ^ a b CDC volume 12 number 1
  18. ^ The Definition and Measurement of Dangerous Research by Alex Greninger
  19. ^ Influenza B and C Virus NEP (NS2) Proteins Possess Nuclear Export Activities Journal of Virology, August 2001, p. 7375-7383, Vol. 75, No. 16
  20. ^ A novel influenza A virus mitochondrial protein that induces cell death Nature Medicine 7, 1306 - 1312 (2001) doi:10.1038/nm1201-1306
  21. ^ The Threat of Pandemic Influenza: Are We Ready? Page 126
  22. ^ New genotype of avian influenza H5N1 viruses isolated from tree sparrows in China by Z. Kou, F. M. Lei, J. Yu, Z. J. Fan, Z. H. Yin, C. X. Jia, K. J. Xiong, Y. H. Sun, X. W. Zhang, X. M. Wu, X. B. Gao and T. X. Li in Journal of Virology (2005) volume 79, pages 15460-15466.
  23. ^ Evolution of the receptor binding phenotype of influenza A (H5) viruses by A. Gambaryan, A. Tuzikov, G. Pazynina, N. Bovin, A. Balish and A. Klimov in Virology (2005) electronic release on October 11 ahead of print publication.
  24. ^ The evolution of H5N1 influenza viruses in ducks in southern China by H. Chen, G. Deng, Z. Li, G. Tian, Y. Li, P. Jiao, L. Zhang, Z. Liu, R. G. Webster and K. Yu in Proceedings of the National Academy of Sciences of the United States of America (2004) volume 101, pages 10452-10457.

Hemagglutinin, as depicted in a simplified molecular model. ... January 15 is the 15th day of the year in the Gregorian calendar. ... For album titles with the same name, see 2002 (album). ... For the Manfred Mann album, see 2006 (album). ... December 9 is the 343rd day (344th in leap years) of the year in the Gregorian calendar. ... July 16 is the 197th day (198th in leap years) of the year in the Gregorian Calendar, with 168 days remaining. ... 2004 (MMIV) was a leap year starting on Thursday of the Gregorian calendar. ... For the Manfred Mann album, see 2006 (album). ... December 9 is the 343rd day (344th in leap years) of the year in the Gregorian calendar. ... January 2006 : ← - January - February - March - April - May - June - July - August - September - October - November - December- → Iranian President Mahmoud Ahmadinejad accuses European nations of trying to complete the Holocaust by creating a Jewish camp Israel in the Middle East. ... The Proceedings of the National Academy of Sciences of the United States of America, usually referred to as PNAS, is the official journal of the United States National Academy of Sciences. ...

Further reading

  • Influenza Report 2006 Online book. Research level quality information. Highly recommended.
  • Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution Nature magazine presents a summary of what has been discovered in the Influenza Genome Sequencing Project.
  • Links and descriptions to abstracts and full texts This bibliography of avian influenza publications was complied through the cooperative effort of the USGS National Wildlife Health Center and the Wildlife Disease Information Node.
  • Search for research publications about H5N1: Entez PubMed
  • Latest publications on H5N1
  • Full HTML text of Avian Influenza A (H5N1) Infection in Humans by The Writing Committee of the World Health Organization (WHO) Consultation on Human Influenza A/H5 in the September 29, 2005 New England Journal of Medicine
  • Evolutionary "Tree of Life" for H5N1:
    • Here is the phylogenetic tree of the influenza virus hemagglutinin gene segment. Amino acid changes in three lineages (bird, pig, human) of the influenza virus hemagglutinin protein segment HA1.
    • Here is the tree showing the evolution by reassortment of H5N1 from 1999 to 2004 that created the Z genotype in 2002.
    • Here is the tree showing evolution by antigenic drift since 2002 that created dozens of highly pathogenic varieties of the Z genotype of avian flu virus H5N1, some of which are increasingly adapted to mammals.
    • WHO (PDF} contains latest Evolutionary "Tree of Life" for H5N1 article Antigenic and genetic characteristics of H5N1 viruses and candidate H5N1 vaccine viruses developed for potential use as pre-pandemic vaccines published August 18, 2006
  • Evolutionary characterization of the six internal genes of H5N1 human influenza A virus
  • Genome database Page links to the complete sequence of the Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) genome.


 

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