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Encyclopedia > Protein disulfide isomerase
protein disulfide isomerase family A, member 2
Identifiers
Symbol PDIA2
Alt. Symbols PDIP
Entrez 64714
HUGO 14180
OMIM 608012
RefSeq NM_006849
UniProt Q13087
Other data
Locus Chr. 16 p13.3
protein disulfide isomerase family A, member 3
Identifiers
Symbol PDIA3
Alt. Symbols GRP58
Entrez 2923
HUGO 4606
OMIM 602046
RefSeq NM_005313
UniProt P30101
Other data
Locus Chr. 15 q15
protein disulfide isomerase family A, member 4
Identifiers
Symbol PDIA4
Entrez 9601
HUGO 30167
RefSeq NM_004911
UniProt P13667
Other data
Locus Chr. 7 q35
protein disulfide isomerase family A, member 5
Identifiers
Symbol PDIA5
Entrez 10954
HUGO 24811
RefSeq NM_006810
UniProt Q14554
Other data
EC number 5.3.4.1
Locus Chr. 3 q21.1
protein disulfide isomerase family A, member 6
Identifiers
Symbol PDIA6
Alt. Symbols TXNDC7
Entrez 10130
HUGO 30168
RefSeq NM_005742
UniProt Q15084
Other data
Locus Chr. 2 p25.1

Protein disulfide isomerase or PDI (EC 5.3.4.1) is an enzyme in the endoplasmic reticulum in eukaryotes or periplasmic space of prokaryotes that catalyzes the formation and breakage of disulfide bonds between cysteine residues within proteins as they fold. This allows proteins to quickly find the correct arrangement of disulfide bonds in their fully folded state and therefore the enzyme acts to catalyze protein folding. Conversely, reduced (dithiol) form of PDI is able to catalyse a reduction of mispaired thiol residues of a particular substrate, acting as an isomerase. Therefore, PDI is capable of catalyzing the post-translational disulfide exchange. Such exchange reactions can occur intramolecularly, leading to the rearrangement of disulphide bonds in a single protein. The Entrez logo The Entrez Global Query Cross-Database Search System allows access to databases at the National Center for Biotechnology Information (NCBI) website. ... Look up Hugo in Wiktionary, the free dictionary. ... The Mendelian Inheritance in Man project is a database that catalogues all the known diseases with a genetic component, and - when possible - links them to the relevant genes in the human genome. ... National Center for Biotechnology Information logo The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health. ... Swiss-Prot is a curated biological database of protein sequences created in 1986 by Amos Bairoch during his PhD and developed by the Swiss Institute of Bioinformatics and the European Bioinformatics Institute. ... Short and long arms Chromosome. ... Chromosome 16 is one of the 23 pairs of chromosomes in humans. ... The Entrez logo The Entrez Global Query Cross-Database Search System allows access to databases at the National Center for Biotechnology Information (NCBI) website. ... Look up Hugo in Wiktionary, the free dictionary. ... The Mendelian Inheritance in Man project is a database that catalogues all the known diseases with a genetic component, and - when possible - links them to the relevant genes in the human genome. ... National Center for Biotechnology Information logo The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health. ... Swiss-Prot is a curated biological database of protein sequences created in 1986 by Amos Bairoch during his PhD and developed by the Swiss Institute of Bioinformatics and the European Bioinformatics Institute. ... Short and long arms Chromosome. ... Chromosome 15 is one of the 23 pairs of chromosomes in humans. ... The Entrez logo The Entrez Global Query Cross-Database Search System allows access to databases at the National Center for Biotechnology Information (NCBI) website. ... Look up Hugo in Wiktionary, the free dictionary. ... National Center for Biotechnology Information logo The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health. ... Swiss-Prot is a curated biological database of protein sequences created in 1986 by Amos Bairoch during his PhD and developed by the Swiss Institute of Bioinformatics and the European Bioinformatics Institute. ... Short and long arms Chromosome. ... Chromosome 7 is one of the 23 pairs of chromosomes in humans. ... The Entrez logo The Entrez Global Query Cross-Database Search System allows access to databases at the National Center for Biotechnology Information (NCBI) website. ... Look up Hugo in Wiktionary, the free dictionary. ... National Center for Biotechnology Information logo The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health. ... Swiss-Prot is a curated biological database of protein sequences created in 1986 by Amos Bairoch during his PhD and developed by the Swiss Institute of Bioinformatics and the European Bioinformatics Institute. ... The Enzyme Commission number (EC number) is a numerical classification scheme for enzymes, based on the chemical reactions they catalyze. ... Short and long arms Chromosome. ... Chromosome 3 is one of the 23 pairs of chromosomes in humans. ... The Entrez logo The Entrez Global Query Cross-Database Search System allows access to databases at the National Center for Biotechnology Information (NCBI) website. ... Look up Hugo in Wiktionary, the free dictionary. ... National Center for Biotechnology Information logo The National Center for Biotechnology Information (NCBI) is part of the United States National Library of Medicine (NLM), a branch of the National Institutes of Health. ... Swiss-Prot is a curated biological database of protein sequences created in 1986 by Amos Bairoch during his PhD and developed by the Swiss Institute of Bioinformatics and the European Bioinformatics Institute. ... Short and long arms Chromosome. ... Chromosome 2 is one of the 23 pairs of chromosomes in humans. ... The Enzyme Commission number (EC number) is a numerical classification scheme for enzymes, based on the chemical reactions they catalyze. ... Ribbon diagram of the enzyme TIM, surrounded by the space-filling model of the protein. ... The endoplasmic reticulum or ER is an organelle found in all eukaryotic cells that is an interconnected network of tubules, vesicles and cisternae that is responsible for several specialized functions: Protein translation, folding, and transport of proteins to be used in the cell membrane (e. ... In chemistry, a disulfide bond is a single covalent bond derived from the coupling of thiol groups. ... Cysteine is a naturally occurring, sulfur-containing amino acid that is found in most proteins, although only in small quantities. ... A representation of the 3D structure of myoglobin, showing coloured alpha helices. ... Protein folding is the process by which a protein assumes its characteristic functional shape or tertiary structure, also known as the native state. ... In biochemistry, an isomerase is a protein that catalyses the interconversion of polymers. ...


Another major function of PDI relates to its activity as a chaperone, i.e. it aids wrongly folded proteins to reach a correctly folded state without the aid of enzymatic disulfide shuffling.


PDI has been found to be involved in the breaking of bonds on the HIV gp120 protein during HIV infection of CD4 positive cells and is required for HIV infection of lymphocytes and monoctyes. Some studies have shown it to be avialable for HIV infection on the surface of the cell clustered around the CD4 protein yet conflicting studies have shown that it is not available on the cell surface but instead is found in significant amounts in the blood plasma.


Other functions

PDI helps load antigenic peptides into MHC class I molecules. These molecules (MHC I) are related to the peptide presentation by APC in the immunity response.


Assays used for PDI activity

Insulin Turbidity Assay: PDI breaks the two disulfide bonds between two insulin (a and b) chains that results in precipitation of b chain. This precipitation can be monitored at 620 nm which is indirectly used monitor PDI activity (1). Sensitivity of this assay is in micromolar range.


ScRNase assay: PDI converts scrambled (inactive) RNase into native (active) RNase that further acts on its substrate (2). The sensitivty is in micromolar range.


Di-E-GSSG assay: This is the flurometric assay that can detect picomolar quantities of PDI and therefore is the most sensitive assay to date for detecting PDI activity (3). Di-E-GSSG has two eosin molecules attached to oxidized glutathione (GSSG). The proximity of eosin molecules leads to the quenching of its fluorescence. However, upon breakage of disulfide bond by PDI, fluorescence increases 70-fold.


1)Lundstrom J., Holmgren A. Protein disulfide-isomerase is a substrate for thioredoxin reductase and has thioredoxin-like activity. J. Biol. Chem. 1990;265:9114–9120.


2)Lyles M. M., Gilbert H. F. Catalysis of the oxidative folding of ribonuclease A by protein disulfide isomerase: dependence of the rate on the composition of the redox buffer. J. Biol. Chem. 1991;30:613–619


3)Raturi A., Mutus B. Characterization of redox state and reductase activity of protein disulfide isomerase under different redox environments using a sensitive fluorescent assay Free Radic Biol Med. 2007 ;43(1):62-70.


  Results from FactBites:
 
Literature Review: Evolution caught in the act? (3616 words)
They decided that a good candidate would be a protein called thioredoxin, because they knew it had a structure similar to one of the components of the trashed system, and has the basic chemical material needed for the job.
proteins (parts/functions) all of which or most of which are essential for the flagella to even exist and beyond that to perform its function of moving a bacterium.
The thioredoxin is then intentionally modified in four key places such that it is then identical to or at least similar to the missing native protein system that normally performs the task of creating these disulfide bonds in one of the proteins of the flagella.
Publications (1688 words)
A fluorescence-based assay for the reductase activity of protein disulfide isomerase.
Menestrina G. Interaction of ostreolysin, a cytolytic protein from the edible mushroom Pleurotus ostreatus, with lipid membranes and modulation by lysophospholipids Eur J Biochem 270: 1199-1210.
In The comprehensive sourcebook of bacterial protein toxins.
  More results at FactBites »


 

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