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Encyclopedia > Short tandem repeats

The short tandem repeats (STR) are tandemly repeated DNA sequences of a pattern of length from 2 to 10 bp (for example (CA)n(TG)n in a genomics region) and the total size is lower than 100 bp.


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  Results from FactBites:
 
short tandem repeat: Information from Answers.com (525 words)
A short tandem repeat (STR) in DNA is a class of polymorphisms that occurs when a pattern of two or more nucleotides are repeated and the repeated sequences are directly adjacent to each other.
The STRs in use today for forensic analysis are all tetra- or penta-nucleotide repeats (4 or 5 repeat units), as these give a high degree of error-free data while being robust enough to survive degradation in non-ideal conditions.
Shorter repeat sequences tend to suffer from artifacts such as stutter and preferential amplification, as well as the fact that several genetic diseases are associated with tri-nucleotide repeats such as Huntington's disease.
[3] Tandem Repeats (332 words)
Tandem repeats are an array of consecutive repeats.
Its repeat unit is 171 bp and the repetitive region accounts for 3-5% of the DNA in each chromosome.
Microsatellites are also known as short tandem repeats (STR), because a repeat unit consists of only 1 to 6 bp and the whole repetitive region spans less than 150 bp.
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